| category |
|
A tag to categorize the type of comment.
List of categories used:
- by analogy to: <XNnnnnnnnnn>
- For reactions deduced by analogy to other reactions.
- + quality "putative"
- CONFLICT! (text mentions both ACCNOS)
- If a conflict exists between two papers, this is used to indicate that one exists,
and in addition to the annotates of those papers, a third annotate with category
"CONFLICT!" is entered, which in its text body mentions the accession numbers
of those papers.
- disease
- Tells about in which disease(s) the molecule is involved. Queries can be executed by using keywords out of a list
 .
- enzyme classification
- experimental inhibitor
- Names artificial compounds that can inhibit reactions or the function of molecules.
- general
- Contains comments that do not fit elsewhere.
- GO: biological process
- Associated GO-terms (Gene Ontology) and GO evidence code:
e.g. "induction of proapoptotic gene products; IEA"
hyperlink containing the corresponding GO ID (here GO:0008633)
- Associations of TRANSPATH® Molecules with Gene Ontology terms (Gene Ontology: tool for the unification of biology. The Gene Ontology Consortium (2000) Nature Genet. 25: 25-29) were mainly obtained by electronic annotation using a gene association data list from Compugen Inc. (http://www.cgen.com/, http://www.labonweb.com).
- historical
- kinetics
- Specification of kinetic parameters, e.g. KM = 2.4 mmol/l.
- mechanism
- Gives information about the mechanism of a reaction, e.g. signaling by substructures (motifs, part of complexes) or phosphorylation sites, e.g. xxx is phosphorylated at Tyr32.
- methods
- Contains additional information about methods and material used in experiments that are listed in the fields location positive/negative and experiment(s).
- physiological function
- Mentions physiological or environmental influences that affect
the certain molecule or reaction, or tells something about the effects the entry has; e.g. IL-1 has inflammatory effects.
- sequence
- structure
|
 
|
